Researcher Database

KIKUCHI Takeshi

Department / Course College of Life Sciences Department of Bioinformatics

Title / Position Professor

Papers
1.	2011	Analyses of Protein Sequences Using Inter-Residue Average Distance Statistics to Study Folding Processes and the Significance of Their Partial Sequences │ Peptide & Protein Letters │ 18,pp.979-990 (Co-authored)
2.	2011	Analysis of the Local Sequences of Folding Sites in β Sandwich Proteins with Inter-Residue Average Distance Statistics │ The Open Bioinformatics Journal │ 5,pp.59-68 (Co-authored)
3.	2011	Engineering the substrate specificity of Alcaligenesd-aminoacylase useful for the production of d-amino acids by optical resolution │ Journal of Chromatography B. Analytical Technologies in the Biomedical and Life Sciences │ 879,pp.3247– 3252 (Co-authored)
4.	2011	In silico study on the substrate binding manner in human myo-inositol monophosphatase 2 │ Journal of molecular modeling │ 17,pp.2559–2567 (Co-authored)
5.	2011	Prediction of protein folding properties with analyses of inter-residue average distance statistics │ Peptide & Protein Letters │ 18,pp.979-990 (Sole-authored)
6.	2010	Absence of Binding between the Human Transferrin Receptor and the Transferrin Complex of Biological Toxic Trace Element, Aluminum, Because of an Incomplete Open/Closed Form of the Complex │ Biological Trace Element Research │ (136),pp.279-286 (Co-authored)
7.	2009	Estimation of Relative Binding Free Energy Based on a Free Energy Variational Principle for Quantitative Structure Activity Relationship Analyses │ Chemycal Physics │ (365),pp.53-59 (Co-authored)
8.	2009	Spin correlations in a no frustrated one-dimensional spin system and the formation of the ground state as a model of protein folding │ Physica A: Statistical Mechanics and its Applications │ (388),pp.129 (Co-authored)
9.	2008	Analysis of 3D structural differences in the IgG-binding domains based on the interresidue average-distance statistics │ Amino Acids │ 5,pp.541-549 (Sole-authored)
10.	2007	Analysis of the differences in the folding mechanisms of c-type lysozymes based on contact maps constructed with interresidue average distances │ Journal of Molecular Modeling │ 13,pp.587-594 (Co-authored)
11.	2006	Molecular Dynamics Approach to Study the Discrepancies in the Thermal Behavior of Amylose and Chitosan Conformations │ Journal of Molecular Structure │ THEOCHEM 764,pp.133-140 (Co-authored)
12.	2005	Prediction of Folding Pathway and Kinetics Among Plant Hemoglobins by Using an Average Distance Map Method │ Proteins: Structure, Function and Bioinformatics │ 61,pp.500-506 (Co-authored)
13.	2004	Detection of Pairwise Residue Proximity by Covariation Analysis for 3D-Structure Prediction of G-Protein-Coupled Receptors │ The Protein Journal │ 23,pp.427-435 (Co-authored)
14.	2003	Analysis of the Differences of the Folding Kinetics of Structurally Homologous Proteins based on the Predictions of the Gross feature of the Residue Contacts │ Proteins: Structure, Function and Genetics │ ,pp.51, 515-530 (Co-authored)
15.	2002	V Nucleotide Binding Sites in V-type Na+-ATPase from Enterococcus hirae │ Journal of Biochemistry │ ,pp.132, 789-794 (Co-authored)
16.	2000	Contact maps derived from the statistics of average distances between residues in proteins. Application to the prediction of structures and active sites of proteins and peptides. │ Recent Research Developments in Protein Engineering (Research Signpost, India)2 │ ,pp.1-48 (Sole-authored)